Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.38□□□□□ -0.11
USP9XQ93008 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9XQ93008 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
USP9XQ93008 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9XQ93008 KRT18P55-202ENST00000578578 1546 ntBASIC14.38□□□□□ -0.11
USP9XQ93008 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9XQ93008 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
USP9XQ93008 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9XQ93008 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9XQ93008 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
USP9XQ93008 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9XQ93008 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.37□□□□□ -0.11
USP9XQ93008 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.37□□□□□ -0.11
USP9XQ93008 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9XQ93008 AL365330.1-201ENST00000607459 531 ntBASIC14.37□□□□□ -0.11
USP9XQ93008 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9XQ93008 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.37□□□□□ -0.11
USP9XQ93008 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9XQ93008 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9XQ93008 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9XQ93008 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9XQ93008 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9XQ93008 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9XQ93008 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
USP9XQ93008 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9XQ93008 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
USP9XQ93008 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
USP9XQ93008 YBX1P6-201ENST00000442962 1002 ntBASIC14.36□□□□□ -0.11
USP9XQ93008 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.36□□□□□ -0.11
USP9XQ93008 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.36□□□□□ -0.11
USP9XQ93008 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
USP9XQ93008 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.36□□□□□ -0.11
USP9XQ93008 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.36□□□□□ -0.11
USP9XQ93008 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
USP9XQ93008 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
USP9XQ93008 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 AL008638.5-201ENST00000623814 1298 ntBASIC14.36□□□□□ -0.11
USP9XQ93008 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
USP9XQ93008 AL355312.1-201ENST00000407115 2176 ntBASIC14.36□□□□□ -0.11
USP9XQ93008 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
USP9XQ93008 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9XQ93008 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
USP9XQ93008 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 PFN1P12-201ENST00000455938 534 ntBASIC14.35□□□□□ -0.11
USP9XQ93008 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.35□□□□□ -0.11
USP9XQ93008 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
USP9XQ93008 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.35□□□□□ -0.11
USP9XQ93008 RARRES2P5-201ENST00000564013 466 ntBASIC14.35□□□□□ -0.11
USP9XQ93008 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.35□□□□□ -0.11
USP9XQ93008 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.35□□□□□ -0.11
USP9XQ93008 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 KRT8P22-201ENST00000562317 1415 ntBASIC14.35□□□□□ -0.11
USP9XQ93008 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USP9XQ93008 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms