Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TCAF2P1-201ENST00000291129 2421 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 AL391807.1-203ENST00000604392 2365 ntBASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 SSR4P1-203ENST00000599569 2260 ntBASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L1Q8WWY6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 ABHD17AP1-201ENST00000358206 933 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AP000523.1-201ENST00000398242 1049 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AC034232.1-201ENST00000506026 1064 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 STK19B-204ENST00000512515 211 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AC069224.1-201ENST00000566372 1715 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AL353692.3-201ENST00000407031 1396 ntBASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms