Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 AP001269.4-201ENST00000609611 512 ntBASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC44A1Q8WWI5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 IER3-202ENST00000376377 1350 ntBASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 NUS1P2-201ENST00000417358 873 ntBASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 AL591684.3-201ENST00000605187 298 ntBASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 AL022326.1-202ENST00000641533 845 ntBASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC44A1Q8WWI5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 AL139424.1-201ENST00000607572 797 ntBASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 NPAP1P7-201ENST00000613027 823 ntBASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms