Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 MIR1199-201ENST00000621445 119 ntBASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP1Q8TDR0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 HLA-J-202ENST00000469281 1241 ntBASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 RPS15P9-201ENST00000494093 319 ntBASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 RNPS1P1-201ENST00000507437 918 ntBASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 AC013467.2-201ENST00000605472 835 ntBASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP1Q8TDR0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AC006538.1-201ENST00000567905 1585 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AC002310.6-201ENST00000624451 1377 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 FAM197Y8-203ENST00000450145 560 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 EMBP1-201ENST00000458200 901 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AF186996.4-201ENST00000467186 377 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AC136632.2-201ENST00000512891 861 ntBASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms