Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AP001889.1-201ENST00000525414 633 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AL359711.2-201ENST00000563105 872 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 DUX4L45-201ENST00000566406 1057 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AL118558.3-201ENST00000607414 1079 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AL355312.1-201ENST00000407115 2176 ntBASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 RPS2P36-201ENST00000456516 831 ntBASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 LINC01115-203ENST00000606068 577 ntBASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 TDH-203ENST00000531764 1110 ntBASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.05□□□□□ -0.64
ALMS1Q8TCU4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC138627.1-207ENST00000641560 1006 ntBASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 KRT8P39-201ENST00000396270 1433 ntBASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms