Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 AC012615.1-201ENST00000565797 1299 ntBASIC18.6■□□□□ 0.57
ZNF397Q8NF99 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 AC011467.2-201ENST00000598425 242 ntBASIC18.6■□□□□ 0.57
ZNF397Q8NF99 AD001527.2-201ENST00000622994 785 ntBASIC18.6■□□□□ 0.57
ZNF397Q8NF99 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF397Q8NF99 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF397Q8NF99 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF397Q8NF99 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 AC073592.5-201ENST00000624854 528 ntBASIC18.58■□□□□ 0.56
ZNF397Q8NF99 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 NSUN5P1-202ENST00000421140 1535 ntBASIC18.58■□□□□ 0.56
ZNF397Q8NF99 NSUN5P2-203ENST00000457352 1529 ntBASIC18.58■□□□□ 0.56
ZNF397Q8NF99 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF397Q8NF99 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF397Q8NF99 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms