Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF440Q8IYI8 AC092171.3-201ENST00000610122 2651 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 ME2P1-201ENST00000426028 1970 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 FAM185BP-201ENST00000443595 716 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 MIR4751-201ENST00000578027 74 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 UBALD1-205ENST00000590891 2641 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 AL512652.2-201ENST00000625156 1716 ntBASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ZNF440Q8IYI8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 AC098831.1-202ENST00000438821 336 ntBASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 MIR4515-201ENST00000584082 81 ntBASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 MIR7706-201ENST00000613747 67 ntBASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF440Q8IYI8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF440Q8IYI8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF440Q8IYI8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF440Q8IYI8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF440Q8IYI8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF440Q8IYI8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms