Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 KRT18P57-201ENST00000443599 1254 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 VENTXP7-201ENST00000475503 772 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AC011498.5-201ENST00000592027 486 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AC012306.2-201ENST00000609350 630 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AL139011.1-202ENST00000642063 584 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AC006277.1-201ENST00000624348 1610 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 NORAD-201ENST00000565493 5339 ntBASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 AP002414.1-201ENST00000391405 1147 ntBASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 AC097493.4-201ENST00000641197 219 ntBASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUDCD3Q8IVD9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AL020989.1-201ENST00000422979 469 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AL671277.2-201ENST00000458060 996 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC091607.1-201ENST00000490318 1060 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 KRT8P26-201ENST00000534154 1276 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 AC013467.2-201ENST00000605472 835 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUDCD3Q8IVD9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms