Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 MIR6080-201ENST00000617359 66 ntBASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AL139011.1-202ENST00000642063 584 ntBASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3BQ7Z3V4 AC073439.1-201ENST00000624121 1774 ntBASIC20.77■□□□□ 0.91
UBE3BQ7Z3V4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
UBE3BQ7Z3V4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBE3BQ7Z3V4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 KLF2P3-201ENST00000451977 1087 ntBASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
UBE3BQ7Z3V4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AC125807.1-201ENST00000483097 614 ntBASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 RNF216P1-203ENST00000404404 2427 ntBASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UBE3BQ7Z3V4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.74■□□□□ 0.91
UBE3BQ7Z3V4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UBE3BQ7Z3V4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms