Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 AC103564.2-201ENST00000432853 1299 ntBASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TP73-AS1-210ENST00000637775 1455 ntBASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 AC063926.3-201ENST00000624734 5658 ntBASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 IGHV3-52-201ENST00000519770 353 ntBASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC111152.3-201ENST00000569699 673 ntBASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM53Q6P2H8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms