Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 GGT4P-201ENST00000623672 1708 ntBASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 MST1L-201ENST00000442552 2185 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC068418.2-201ENST00000577309 3703 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AL020989.1-201ENST00000422979 469 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 PMPCAP1-201ENST00000508114 1576 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC148477.5-201ENST00000625164 1645 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC063926.3-201ENST00000624734 5658 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC126177.1-201ENST00000547829 2218 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC006449.6-201ENST00000612330 2296 ntBASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LINC00242Q5T6M2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AC097637.2-201ENST00000624096 1997 ntBASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms