Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC4Q5GLZ8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC006277.1-201ENST00000624348 1610 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC108751.1-201ENST00000490852 363 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC107918.2-201ENST00000530817 355 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 SPCS2P1-201ENST00000561636 679 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 OR7E47P-204ENST00000575924 449 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 MPDU1-223ENST00000582151 728 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 MIR4469-201ENST00000583919 79 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 AC129492.6-201ENST00000611383 1305 ntBASIC18.71■□□□□ 0.59
HERC4Q5GLZ8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HERC4Q5GLZ8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
HERC4Q5GLZ8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HERC4Q5GLZ8 UBALD1-205ENST00000590891 2641 ntBASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 AC064836.3-201ENST00000607928 673 ntBASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 AC079328.2-201ENST00000561241 3354 ntBASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC4Q5GLZ8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 CNN2P11-201ENST00000429351 262 ntBASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC4Q5GLZ8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms