Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SPTLC1P1-201ENST00000447199 261 ntBASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 MIR4453-201ENST00000584019 89 ntBASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 WASH6P-202ENST00000359512 1437 ntBASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 AC100757.3-201ENST00000622361 1406 ntBASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 U91328.1-201ENST00000437528 223 ntBASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.85■□□□□ 0.45
CTC1Q2NKJ3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 AC012569.1-201ENST00000591191 1524 ntBASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 AC073592.8-201ENST00000624126 511 ntBASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTC1Q2NKJ3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTC1Q2NKJ3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms