Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH17Q12864 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH17Q12864 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.91■□□□□ 0.3
CDH17Q12864 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 AP002469.2-201ENST00000531724 424 ntBASIC16.91■□□□□ 0.3
CDH17Q12864 AC104692.2-201ENST00000603054 253 ntBASIC16.91■□□□□ 0.3
CDH17Q12864 AC117500.6-201ENST00000624871 588 ntBASIC16.91■□□□□ 0.3
CDH17Q12864 AL031731.1-201ENST00000642131 2094 ntBASIC16.91■□□□□ 0.3
CDH17Q12864 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH17Q12864 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH17Q12864 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH17Q12864 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 AC092364.2-201ENST00000596710 2692 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDH17Q12864 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 AL031284.1-201ENST00000419297 478 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 AC092910.1-201ENST00000482027 1129 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH17Q12864 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDH17Q12864 KRT126P-201ENST00000549467 1181 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 AL160237.2-201ENST00000556165 472 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 AC004790.2-201ENST00000623588 572 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH17Q12864 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 GGT4P-201ENST00000623672 1708 ntBASIC16.9■□□□□ 0.3
CDH17Q12864 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH17Q12864 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH17Q12864 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH17Q12864 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH17Q12864 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH17Q12864 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH17Q12864 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH17Q12864 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH17Q12864 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH17Q12864 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH17Q12864 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms