Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
SNRPFP62306 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNRPFP62306 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 UBALD1-205ENST00000590891 2641 ntBASIC18.15■□□□□ 0.5
SNRPFP62306 AC092171.3-201ENST00000610122 2651 ntBASIC18.15■□□□□ 0.5
SNRPFP62306 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRPFP62306 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.14■□□□□ 0.5
SNRPFP62306 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNRPFP62306 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNRPFP62306 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNRPFP62306 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SNRPFP62306 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNRPFP62306 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNRPFP62306 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRPFP62306 AC004832.2-201ENST00000426397 482 ntBASIC18.14■□□□□ 0.49
SNRPFP62306 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRPFP62306 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.14■□□□□ 0.49
SNRPFP62306 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNRPFP62306 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 PMS2P7-201ENST00000506558 1336 ntBASIC18.14■□□□□ 0.49
SNRPFP62306 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.14■□□□□ 0.49
SNRPFP62306 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRPFP62306 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNRPFP62306 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 KRT18P34-201ENST00000488218 1270 ntBASIC18.13■□□□□ 0.49
SNRPFP62306 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.13■□□□□ 0.49
SNRPFP62306 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.13■□□□□ 0.49
SNRPFP62306 AL671883.3-201ENST00000603274 991 ntBASIC18.13■□□□□ 0.49
SNRPFP62306 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.13■□□□□ 0.49
SNRPFP62306 AC084018.2-201ENST00000613093 2607 ntBASIC18.13■□□□□ 0.49
SNRPFP62306 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.13■□□□□ 0.49
SNRPFP62306 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRPFP62306 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.12■□□□□ 0.49
SNRPFP62306 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNRPFP62306 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.12■□□□□ 0.49
SNRPFP62306 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.12■□□□□ 0.49
SNRPFP62306 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 AL078644.1-201ENST00000609881 752 ntBASIC18.12■□□□□ 0.49
SNRPFP62306 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.12■□□□□ 0.49
SNRPFP62306 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SNRPFP62306 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNRPFP62306 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNRPFP62306 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRPFP62306 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.11■□□□□ 0.49
SNRPFP62306 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms