Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SEC61A1P61619 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SEC61A1P61619 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 BX276092.7-203ENST00000637198 1536 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 FAM220CP-201ENST00000395253 831 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 AC096633.1-201ENST00000422446 749 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 FGFR3P6-201ENST00000457012 610 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 AC079776.4-201ENST00000511039 504 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.73□□□□□ -0.05
SEC61A1P61619 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.73□□□□□ -0.05
SEC61A1P61619 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.73□□□□□ -0.05
SEC61A1P61619 AL355877.3-201ENST00000622820 899 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 AC148477.8-201ENST00000624298 468 ntBASIC14.73□□□□□ -0.05
SEC61A1P61619 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SEC61A1P61619 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.73□□□□□ -0.05
SEC61A1P61619 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SEC61A1P61619 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SEC61A1P61619 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 AC097374.2-201ENST00000618617 1306 ntBASIC14.72□□□□□ -0.05
SEC61A1P61619 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SEC61A1P61619 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 ABCD1P5-201ENST00000445663 754 ntBASIC14.72□□□□□ -0.05
SEC61A1P61619 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 AC106795.1-205ENST00000512851 1056 ntBASIC14.72□□□□□ -0.05
SEC61A1P61619 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.72□□□□□ -0.05
SEC61A1P61619 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
SEC61A1P61619 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SEC61A1P61619 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 AC104640.1-201ENST00000562617 2109 ntBASIC14.72□□□□□ -0.05
SEC61A1P61619 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms