Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HLA-J-202ENST00000469281 1241 ntBASIC14.62□□□□□ -0.07
CLDN12P56749 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.62□□□□□ -0.07
CLDN12P56749 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN12P56749 TMEM191A-211ENST00000637163 1067 ntBASIC14.62□□□□□ -0.07
CLDN12P56749 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLDN12P56749 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN12P56749 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CLDN12P56749 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN12P56749 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLDN12P56749 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 AC104640.1-201ENST00000562617 2109 ntBASIC14.62□□□□□ -0.07
CLDN12P56749 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN12P56749 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
CLDN12P56749 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.61□□□□□ -0.07
CLDN12P56749 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 AL353801.3-201ENST00000609898 542 ntBASIC14.61□□□□□ -0.07
CLDN12P56749 AC073592.5-201ENST00000624854 528 ntBASIC14.61□□□□□ -0.07
CLDN12P56749 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 LINC00895-201ENST00000629028 1637 ntBASIC14.61□□□□□ -0.07
CLDN12P56749 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN12P56749 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.61□□□□□ -0.07
CLDN12P56749 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN12P56749 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN12P56749 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 AL603832.2-201ENST00000566195 2125 ntBASIC14.6□□□□□ -0.07
CLDN12P56749 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN12P56749 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN12P56749 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN12P56749 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN12P56749 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLDN12P56749 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CLDN12P56749 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN12P56749 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN12P56749 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CLDN12P56749 TSPY5P-201ENST00000426936 936 ntBASIC14.6□□□□□ -0.07
CLDN12P56749 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 AL137013.1-201ENST00000432946 1228 ntBASIC14.6□□□□□ -0.07
CLDN12P56749 HOMER2P1-201ENST00000455653 964 ntBASIC14.6□□□□□ -0.07
CLDN12P56749 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN12P56749 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.6□□□□□ -0.07
CLDN12P56749 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN12P56749 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN12P56749 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN12P56749 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.6□□□□□ -0.07
CLDN12P56749 AC011840.4-201ENST00000578471 627 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms