Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC004870.1-201ENST00000315132 882 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 AP002469.2-201ENST00000531724 424 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKN2DP55273 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKN2DP55273 AC087641.1-201ENST00000557561 1021 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 AC005412.3-201ENST00000580309 715 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 MIR7706-201ENST00000613747 67 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 PCDHA1-201ENST00000378133 2726 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKN2DP55273 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDKN2DP55273 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDKN2DP55273 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 AC092910.1-201ENST00000482027 1129 ntBASIC16.53■□□□□ 0.24
CDKN2DP55273 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDKN2DP55273 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDKN2DP55273 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDKN2DP55273 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDKN2DP55273 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKN2DP55273 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKN2DP55273 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKN2DP55273 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKN2DP55273 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKN2DP55273 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKN2DP55273 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKN2DP55273 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CDKN2DP55273 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDKN2DP55273 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKN2DP55273 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKN2DP55273 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKN2DP55273 MRPL3P1-201ENST00000400109 1033 ntBASIC16.52■□□□□ 0.24
CDKN2DP55273 MRPL20P1-201ENST00000400819 433 ntBASIC16.52■□□□□ 0.24
CDKN2DP55273 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKN2DP55273 FAAHP1-202ENST00000446499 1238 ntBASIC16.52■□□□□ 0.24
CDKN2DP55273 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKN2DP55273 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
CDKN2DP55273 AL773604.1-201ENST00000617417 272 ntBASIC16.52■□□□□ 0.24
CDKN2DP55273 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKN2DP55273 PGM5P2-202ENST00000637225 1043 ntBASIC16.52■□□□□ 0.24
CDKN2DP55273 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKN2DP55273 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKN2DP55273 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKN2DP55273 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.52■□□□□ 0.23
CDKN2DP55273 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKN2DP55273 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKN2DP55273 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKN2DP55273 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKN2DP55273 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDKN2DP55273 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CDKN2DP55273 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKN2DP55273 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDKN2DP55273 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKN2DP55273 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms