Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.22■□□□□ 0.35
AIF1P55008 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 AC084018.2-201ENST00000613093 2607 ntBASIC17.22■□□□□ 0.35
AIF1P55008 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
AIF1P55008 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AIF1P55008 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.22■□□□□ 0.35
AIF1P55008 AC002056.1-201ENST00000395613 760 ntBASIC17.22■□□□□ 0.35
AIF1P55008 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.22■□□□□ 0.35
AIF1P55008 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.22■□□□□ 0.35
AIF1P55008 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.22■□□□□ 0.35
AIF1P55008 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.22■□□□□ 0.35
AIF1P55008 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.22■□□□□ 0.35
AIF1P55008 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AIF1P55008 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AIF1P55008 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AIF1P55008 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AIF1P55008 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.21■□□□□ 0.35
AIF1P55008 AC112191.1-201ENST00000523689 701 ntBASIC17.21■□□□□ 0.35
AIF1P55008 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.21■□□□□ 0.35
AIF1P55008 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.21■□□□□ 0.35
AIF1P55008 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.21■□□□□ 0.35
AIF1P55008 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.21■□□□□ 0.35
AIF1P55008 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.21■□□□□ 0.35
AIF1P55008 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AIF1P55008 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AIF1P55008 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
AIF1P55008 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.21■□□□□ 0.34
AIF1P55008 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
AIF1P55008 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AIF1P55008 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.2■□□□□ 0.34
AIF1P55008 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.2■□□□□ 0.34
AIF1P55008 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AIF1P55008 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AIF1P55008 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.2■□□□□ 0.34
AIF1P55008 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AIF1P55008 AC002347.1-201ENST00000569543 541 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms