Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEK3P51956 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEK3P51956 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.31■□□□□ 0.36
NEK3P51956 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEK3P51956 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.31■□□□□ 0.36
NEK3P51956 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEK3P51956 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.31■□□□□ 0.36
NEK3P51956 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NEK3P51956 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NEK3P51956 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NEK3P51956 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.3■□□□□ 0.36
NEK3P51956 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.3■□□□□ 0.36
NEK3P51956 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.3■□□□□ 0.36
NEK3P51956 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NEK3P51956 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.3■□□□□ 0.36
NEK3P51956 AC006538.3-201ENST00000612495 578 ntBASIC17.3■□□□□ 0.36
NEK3P51956 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NEK3P51956 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
NEK3P51956 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NEK3P51956 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEK3P51956 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 AC103702.1-201ENST00000548801 2630 ntBASIC17.29■□□□□ 0.36
NEK3P51956 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEK3P51956 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
NEK3P51956 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NEK3P51956 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NEK3P51956 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.28■□□□□ 0.36
NEK3P51956 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.28■□□□□ 0.36
NEK3P51956 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 HCG4B-203ENST00000450128 991 ntBASIC17.28■□□□□ 0.36
NEK3P51956 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.28■□□□□ 0.36
NEK3P51956 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 AC002347.1-201ENST00000569543 541 ntBASIC17.28■□□□□ 0.36
NEK3P51956 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.28■□□□□ 0.36
NEK3P51956 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NEK3P51956 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.28■□□□□ 0.36
NEK3P51956 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.28■□□□□ 0.36
NEK3P51956 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 CYP2T1P-202ENST00000641596 2535 ntBASIC17.28■□□□□ 0.36
NEK3P51956 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEK3P51956 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms