Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPT1AP50416 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CPT1AP50416 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
CPT1AP50416 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.41■□□□□ 0.54
CPT1AP50416 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.41■□□□□ 0.54
CPT1AP50416 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CPT1AP50416 BANF1P1-201ENST00000553684 263 ntBASIC18.41■□□□□ 0.54
CPT1AP50416 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.41■□□□□ 0.54
CPT1AP50416 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CPT1AP50416 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CPT1AP50416 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 AC067852.2-201ENST00000590513 2313 ntBASIC18.41■□□□□ 0.54
CPT1AP50416 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPT1AP50416 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 SNX33P1-201ENST00000592116 1762 ntBASIC18.4■□□□□ 0.54
CPT1AP50416 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.4■□□□□ 0.54
CPT1AP50416 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.4■□□□□ 0.54
CPT1AP50416 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPT1AP50416 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.4■□□□□ 0.54
CPT1AP50416 AP002490.2-201ENST00000524791 560 ntBASIC18.4■□□□□ 0.54
CPT1AP50416 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.4■□□□□ 0.54
CPT1AP50416 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.4■□□□□ 0.54
CPT1AP50416 AL079307.3-201ENST00000556114 283 ntBASIC18.4■□□□□ 0.54
CPT1AP50416 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.4■□□□□ 0.54
CPT1AP50416 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.4■□□□□ 0.54
CPT1AP50416 AL133215.2-201ENST00000609242 977 ntBASIC18.4■□□□□ 0.54
CPT1AP50416 AC008738.7-201ENST00000609744 511 ntBASIC18.4■□□□□ 0.54
CPT1AP50416 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CPT1AP50416 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.4■□□□□ 0.54
CPT1AP50416 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CPT1AP50416 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPT1AP50416 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.4■□□□□ 0.54
CPT1AP50416 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPT1AP50416 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.4■□□□□ 0.54
CPT1AP50416 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPT1AP50416 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPT1AP50416 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPT1AP50416 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CPT1AP50416 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPT1AP50416 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 COX5BP8-201ENST00000416911 349 ntBASIC18.39■□□□□ 0.53
CPT1AP50416 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.39■□□□□ 0.53
CPT1AP50416 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.39■□□□□ 0.53
CPT1AP50416 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.39■□□□□ 0.53
CPT1AP50416 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 AL139011.1-202ENST00000642063 584 ntBASIC18.39■□□□□ 0.53
CPT1AP50416 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CPT1AP50416 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPT1AP50416 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPT1AP50416 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 AC092068.3-201ENST00000587894 2016 ntBASIC18.39■□□□□ 0.53
CPT1AP50416 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPT1AP50416 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPT1AP50416 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms