Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.8□□□□□ -0.04
SOX2P48431 NUS1P1-201ENST00000446295 882 ntBASIC14.8□□□□□ -0.04
SOX2P48431 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.8□□□□□ -0.04
SOX2P48431 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.8□□□□□ -0.04
SOX2P48431 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.8□□□□□ -0.04
SOX2P48431 AP005901.3-202ENST00000581653 237 ntBASIC14.8□□□□□ -0.04
SOX2P48431 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.8□□□□□ -0.04
SOX2P48431 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SOX2P48431 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.8□□□□□ -0.04
SOX2P48431 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.8□□□□□ -0.04
SOX2P48431 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SOX2P48431 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SOX2P48431 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.79□□□□□ -0.04
SOX2P48431 ME2P1-201ENST00000426028 1970 ntBASIC14.79□□□□□ -0.04
SOX2P48431 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.79□□□□□ -0.04
SOX2P48431 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.79□□□□□ -0.04
SOX2P48431 SIGLEC30P-201ENST00000455569 941 ntBASIC14.79□□□□□ -0.04
SOX2P48431 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.79□□□□□ -0.04
SOX2P48431 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.79□□□□□ -0.04
SOX2P48431 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.79□□□□□ -0.04
SOX2P48431 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.79□□□□□ -0.04
SOX2P48431 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 AL021920.2-201ENST00000624828 1351 ntBASIC14.79□□□□□ -0.04
SOX2P48431 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SOX2P48431 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SOX2P48431 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 AC024909.3-201ENST00000611513 2257 ntBASIC14.78□□□□□ -0.04
SOX2P48431 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SOX2P48431 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 AC006538.1-201ENST00000567905 1585 ntBASIC14.78□□□□□ -0.04
SOX2P48431 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms