Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.37□□□□□ -0.43
CKS2P33552 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.37□□□□□ -0.43
CKS2P33552 MTCL1P1-201ENST00000446207 792 ntBASIC12.37□□□□□ -0.43
CKS2P33552 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.37□□□□□ -0.43
CKS2P33552 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.37□□□□□ -0.43
CKS2P33552 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.37□□□□□ -0.43
CKS2P33552 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 C2orf69P3-201ENST00000565542 1120 ntBASIC12.37□□□□□ -0.43
CKS2P33552 NEK4P2-201ENST00000580004 1012 ntBASIC12.37□□□□□ -0.43
CKS2P33552 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.37□□□□□ -0.43
CKS2P33552 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.37□□□□□ -0.43
CKS2P33552 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CKS2P33552 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 UNC93B2-201ENST00000285383 730 ntBASIC12.36□□□□□ -0.43
CKS2P33552 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 RPS2P55-201ENST00000397318 883 ntBASIC12.36□□□□□ -0.43
CKS2P33552 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 KRT18P48-201ENST00000434763 852 ntBASIC12.36□□□□□ -0.43
CKS2P33552 HLA-J-202ENST00000469281 1241 ntBASIC12.36□□□□□ -0.43
CKS2P33552 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.36□□□□□ -0.43
CKS2P33552 AC111152.3-201ENST00000569699 673 ntBASIC12.36□□□□□ -0.43
CKS2P33552 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.36□□□□□ -0.43
CKS2P33552 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CKS2P33552 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
CKS2P33552 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS2P33552 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS2P33552 AC097374.2-201ENST00000618617 1306 ntBASIC12.36□□□□□ -0.43
CKS2P33552 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.35□□□□□ -0.43
CKS2P33552 LINC02228-204ENST00000642115 2962 ntBASIC12.35□□□□□ -0.43
CKS2P33552 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms