Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AP000867.4-201ENST00000641616 219 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 AL139011.1-202ENST00000642063 584 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.34■□□□□ 0.21
EPHA3P29320 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA3P29320 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA3P29320 DBET-201ENST00000630918 3363 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA3P29320 AC233702.3-201ENST00000578656 1387 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 AL603832.2-201ENST00000566195 2125 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA3P29320 GGT3P-204ENST00000453783 1664 ntBASIC16.34■□□□□ 0.21
EPHA3P29320 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.33■□□□□ 0.21
EPHA3P29320 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.33■□□□□ 0.21
EPHA3P29320 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.33■□□□□ 0.21
EPHA3P29320 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
EPHA3P29320 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA3P29320 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EPHA3P29320 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 RCN1P2-201ENST00000398357 915 ntBASIC16.33■□□□□ 0.2
EPHA3P29320 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 AC096582.2-201ENST00000510860 516 ntBASIC16.33■□□□□ 0.2
EPHA3P29320 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHA3P29320 LINC01238-205ENST00000567549 1107 ntBASIC16.33■□□□□ 0.2
EPHA3P29320 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.33■□□□□ 0.2
EPHA3P29320 BNIP3P18-201ENST00000593976 575 ntBASIC16.33■□□□□ 0.2
EPHA3P29320 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHA3P29320 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHA3P29320 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHA3P29320 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 AC016734.2-201ENST00000624325 1377 ntBASIC16.33■□□□□ 0.2
EPHA3P29320 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
EPHA3P29320 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
EPHA3P29320 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
EPHA3P29320 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHA3P29320 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHA3P29320 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHA3P29320 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA3P29320 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 AC211429.1-201ENST00000415277 523 ntBASIC16.32■□□□□ 0.2
EPHA3P29320 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 AC243591.1-201ENST00000452967 1364 ntBASIC16.32■□□□□ 0.2
EPHA3P29320 MINOS1P3-201ENST00000457048 203 ntBASIC16.32■□□□□ 0.2
EPHA3P29320 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 DUX4L26-201ENST00000489078 1255 ntBASIC16.32■□□□□ 0.2
EPHA3P29320 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
EPHA3P29320 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms