Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL3P19876 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.08□□□□□ -0.16
CXCL3P19876 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL3P19876 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL3P19876 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL3P19876 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CXCL3P19876 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.08□□□□□ -0.16
CXCL3P19876 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CXCL3P19876 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCL3P19876 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
CXCL3P19876 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CXCL3P19876 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.07□□□□□ -0.16
CXCL3P19876 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CXCL3P19876 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL3P19876 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 AC079781.5-202ENST00000641784 3743 ntBASIC14.07□□□□□ -0.16
CXCL3P19876 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL3P19876 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
CXCL3P19876 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 LINC00895-201ENST00000629028 1637 ntBASIC14.06□□□□□ -0.16
CXCL3P19876 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CXCL3P19876 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms