Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL3L1P16619 AC023274.1-201ENST00000418278 595 ntBASIC13.82□□□□□ -0.2
CCL3L1P16619 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 KRT19P2-202ENST00000557173 1012 ntBASIC13.82□□□□□ -0.2
CCL3L1P16619 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 AC092865.6-201ENST00000642101 219 ntBASIC13.82□□□□□ -0.2
CCL3L1P16619 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL3L1P16619 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL3L1P16619 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 HLA-A-202ENST00000376806 1854 ntBASIC13.81□□□□□ -0.2
CCL3L1P16619 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 HMGA1P7-201ENST00000406908 502 ntBASIC13.81□□□□□ -0.2
CCL3L1P16619 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL3L1P16619 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL3L1P16619 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL3L1P16619 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL3L1P16619 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL3L1P16619 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 AC099398.1-201ENST00000567919 2776 ntBASIC13.81□□□□□ -0.2
CCL3L1P16619 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 SNX33P1-201ENST00000592116 1762 ntBASIC13.81□□□□□ -0.2
CCL3L1P16619 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL3L1P16619 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL3L1P16619 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms