Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 AL671710.1-201ENST00000610245 2349 ntBASIC17.65■□□□□ 0.42
KRT3P12035 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KRT3P12035 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 IGHV3-22-201ENST00000520721 359 ntBASIC17.65■□□□□ 0.42
KRT3P12035 MIR4751-201ENST00000578027 74 ntBASIC17.65■□□□□ 0.42
KRT3P12035 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT3P12035 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT3P12035 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT3P12035 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KRT3P12035 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT3P12035 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KRT3P12035 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT3P12035 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT3P12035 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT3P12035 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT3P12035 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 PCDHB19P-201ENST00000570871 2371 ntBASIC17.64■□□□□ 0.41
KRT3P12035 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT3P12035 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
KRT3P12035 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.64■□□□□ 0.41
KRT3P12035 HCG4-201ENST00000418983 998 ntBASIC17.64■□□□□ 0.41
KRT3P12035 AC009947.1-201ENST00000444350 727 ntBASIC17.64■□□□□ 0.41
KRT3P12035 RNA5SP415-201ENST00000517246 115 ntBASIC17.64■□□□□ 0.41
KRT3P12035 AC087641.1-201ENST00000557561 1021 ntBASIC17.64■□□□□ 0.41
KRT3P12035 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 CYP2A7P1-201ENST00000595391 815 ntBASIC17.64■□□□□ 0.41
KRT3P12035 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 AP001350.2-201ENST00000625104 1094 ntBASIC17.64■□□□□ 0.41
KRT3P12035 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.64■□□□□ 0.41
KRT3P12035 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT3P12035 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT3P12035 KRT8P39-201ENST00000396270 1433 ntBASIC17.64■□□□□ 0.41
KRT3P12035 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.63■□□□□ 0.41
KRT3P12035 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT3P12035 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 FAM185BP-201ENST00000443595 716 ntBASIC17.63■□□□□ 0.41
KRT3P12035 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT3P12035 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT3P12035 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 AL121894.2-201ENST00000602977 491 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms