Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM3P06753 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.85■□□□□ 0.61
TPM3P06753 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TPM3P06753 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TPM3P06753 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TPM3P06753 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM3P06753 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TPM3P06753 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM3P06753 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM3P06753 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 AL138831.2-201ENST00000606564 490 ntBASIC18.84■□□□□ 0.61
TPM3P06753 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TPM3P06753 FAM45BP-202ENST00000592932 1624 ntBASIC18.84■□□□□ 0.61
TPM3P06753 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM3P06753 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM3P06753 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM3P06753 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.83■□□□□ 0.61
TPM3P06753 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.83■□□□□ 0.61
TPM3P06753 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM3P06753 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TPM3P06753 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TPM3P06753 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.83■□□□□ 0.61
TPM3P06753 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM3P06753 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TPM3P06753 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM3P06753 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 RNF126P1-202ENST00000569893 925 ntBASIC18.83■□□□□ 0.6
TPM3P06753 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TPM3P06753 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TPM3P06753 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TPM3P06753 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM3P06753 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM3P06753 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM3P06753 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.82■□□□□ 0.6
TPM3P06753 VENTXP5-201ENST00000523979 775 ntBASIC18.82■□□□□ 0.6
TPM3P06753 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM3P06753 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TPM3P06753 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.82■□□□□ 0.6
TPM3P06753 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM3P06753 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TPM3P06753 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms