Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPB1P04440 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 AC104819.1-201ENST00000504587 486 ntBASIC15.11■□□□□ 0.01
HLA-DPB1P04440 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 AC104640.1-201ENST00000562617 2109 ntBASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 NSUN5P1-202ENST00000421140 1535 ntBASIC15.11■□□□□ 0.01
HLA-DPB1P04440 NSUN5P2-203ENST00000457352 1529 ntBASIC15.11■□□□□ 0.01
HLA-DPB1P04440 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPB1P04440 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms