Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.11□□□□□ -0.15
CD74P04233 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.11□□□□□ -0.15
CD74P04233 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.11□□□□□ -0.15
CD74P04233 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.11□□□□□ -0.15
CD74P04233 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.11□□□□□ -0.15
CD74P04233 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 FAM45BP-202ENST00000592932 1624 ntBASIC14.11□□□□□ -0.15
CD74P04233 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CD74P04233 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 PPT1-215ENST00000641471 2368 ntBASIC14.1□□□□□ -0.15
CD74P04233 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 AL512652.2-201ENST00000625156 1716 ntBASIC14.1□□□□□ -0.15
CD74P04233 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.1□□□□□ -0.15
CD74P04233 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.1□□□□□ -0.15
CD74P04233 AL845331.1-201ENST00000424978 1190 ntBASIC14.1□□□□□ -0.15
CD74P04233 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.1□□□□□ -0.15
CD74P04233 POU5F1P6-201ENST00000466990 990 ntBASIC14.1□□□□□ -0.15
CD74P04233 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 AC011558.1-201ENST00000623459 338 ntBASIC14.1□□□□□ -0.15
CD74P04233 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.1□□□□□ -0.15
CD74P04233 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.1□□□□□ -0.15
CD74P04233 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CD74P04233 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD74P04233 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms