Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.21□□□□□ -0.3
TRGV3P03979 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV3P03979 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV3P03979 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV3P03979 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV3P03979 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.21□□□□□ -0.3
TRGV3P03979 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV3P03979 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRGV3P03979 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
TRGV3P03979 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV3P03979 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 AC007967.2-201ENST00000432613 625 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV3P03979 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 AC106730.1-201ENST00000566722 1090 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV3P03979 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV3P03979 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV3P03979 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 AC105020.1-201ENST00000435356 2205 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRGV3P03979 PCDHB17P-201ENST00000539533 2393 ntBASIC13.2□□□□□ -0.3
TRGV3P03979 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV3P03979 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV3P03979 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TRGV3P03979 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRGV3P03979 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV3P03979 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 MED15P5-201ENST00000423150 992 ntBASIC13.19□□□□□ -0.3
TRGV3P03979 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV3P03979 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.19□□□□□ -0.3
TRGV3P03979 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV3P03979 CXCL1P1-201ENST00000502804 216 ntBASIC13.19□□□□□ -0.3
TRGV3P03979 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.19□□□□□ -0.3
TRGV3P03979 DUX4L17-201ENST00000557360 1267 ntBASIC13.19□□□□□ -0.3
TRGV3P03979 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 AC064836.3-201ENST00000607928 673 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms