Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC011506.1-201ENST00000474329 610 ntBASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC113404.2-201ENST00000507884 177 ntBASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC093827.2-201ENST00000512654 315 ntBASIC12.65□□□□□ -0.38
HLA-DQA1P01909 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AP000692.2-201ENST00000608391 879 ntBASIC12.65□□□□□ -0.38
HLA-DQA1P01909 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 AC096733.2-201ENST00000609937 1394 ntBASIC12.65□□□□□ -0.38
HLA-DQA1P01909 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DQA1P01909 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DQA1P01909 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DQA1P01909 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 PPT1-215ENST00000641471 2368 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 CRYGFP-201ENST00000418459 633 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 MFAP1P1-201ENST00000442257 1255 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC097488.1-201ENST00000507834 756 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 DGCR10-201ENST00000609839 495 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 REXO1L10P-201ENST00000615707 1290 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 REXO1L12P-201ENST00000622156 912 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC002310.6-201ENST00000624451 1377 ntBASIC12.64□□□□□ -0.39
HLA-DQA1P01909 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DQA1P01909 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 FRMD8P1-201ENST00000440433 1524 ntBASIC12.63□□□□□ -0.39
HLA-DQA1P01909 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms