Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.3□□□□□ -0.28
IFNA1P01562 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
IFNA1P01562 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 TNRC18P2-201ENST00000417666 2714 ntBASIC13.3□□□□□ -0.28
IFNA1P01562 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.3□□□□□ -0.28
IFNA1P01562 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.3□□□□□ -0.28
IFNA1P01562 NCF1B-203ENST00000435988 1254 ntBASIC13.3□□□□□ -0.28
IFNA1P01562 TSPY17P-201ENST00000450329 467 ntBASIC13.3□□□□□ -0.28
IFNA1P01562 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.3□□□□□ -0.28
IFNA1P01562 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.3□□□□□ -0.28
IFNA1P01562 AF186192.3-201ENST00000583427 947 ntBASIC13.3□□□□□ -0.28
IFNA1P01562 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IFNA1P01562 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
IFNA1P01562 AP005117.1-202ENST00000581724 1908 ntBASIC13.3□□□□□ -0.28
IFNA1P01562 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
IFNA1P01562 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFNA1P01562 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
IFNA1P01562 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.29□□□□□ -0.28
IFNA1P01562 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.29□□□□□ -0.28
IFNA1P01562 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.29□□□□□ -0.28
IFNA1P01562 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.29□□□□□ -0.28
IFNA1P01562 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.29□□□□□ -0.28
IFNA1P01562 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFNA1P01562 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.29□□□□□ -0.28
IFNA1P01562 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 AL009178.2-201ENST00000597278 2719 ntBASIC13.28□□□□□ -0.28
IFNA1P01562 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms