Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.17□□□□□ -0.3
TOMM40O96008 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TOMM40O96008 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.17□□□□□ -0.3
TOMM40O96008 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.17□□□□□ -0.3
TOMM40O96008 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.17□□□□□ -0.3
TOMM40O96008 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.17□□□□□ -0.3
TOMM40O96008 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TOMM40O96008 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.17□□□□□ -0.3
TOMM40O96008 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TOMM40O96008 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.17□□□□□ -0.3
TOMM40O96008 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TOMM40O96008 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TOMM40O96008 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TOMM40O96008 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.17□□□□□ -0.3
TOMM40O96008 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.16□□□□□ -0.3
TOMM40O96008 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 KRT8P49-201ENST00000604166 1432 ntBASIC13.16□□□□□ -0.3
TOMM40O96008 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 KRT16P4-201ENST00000453883 522 ntBASIC13.16□□□□□ -0.3
TOMM40O96008 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.16□□□□□ -0.3
TOMM40O96008 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 AC091076.1-201ENST00000610741 619 ntBASIC13.16□□□□□ -0.3
TOMM40O96008 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.16□□□□□ -0.3
TOMM40O96008 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TOMM40O96008 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TOMM40O96008 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TOMM40O96008 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.15□□□□□ -0.3
TOMM40O96008 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TOMM40O96008 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TOMM40O96008 AP005117.1-201ENST00000584346 1413 ntBASIC13.15□□□□□ -0.3
TOMM40O96008 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.15□□□□□ -0.3
TOMM40O96008 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.15□□□□□ -0.3
TOMM40O96008 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TOMM40O96008 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms