Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP3BO95985 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TOP3BO95985 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 GPR89P-201ENST00000407924 1495 ntBASIC17.19■□□□□ 0.34
TOP3BO95985 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.19■□□□□ 0.34
TOP3BO95985 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.19■□□□□ 0.34
TOP3BO95985 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.19■□□□□ 0.34
TOP3BO95985 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.19■□□□□ 0.34
TOP3BO95985 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.19■□□□□ 0.34
TOP3BO95985 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
TOP3BO95985 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP3BO95985 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP3BO95985 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP3BO95985 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TOP3BO95985 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.18■□□□□ 0.34
TOP3BO95985 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.18■□□□□ 0.34
TOP3BO95985 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.18■□□□□ 0.34
TOP3BO95985 AF228730.6-201ENST00000641497 218 ntBASIC17.18■□□□□ 0.34
TOP3BO95985 AP000867.4-201ENST00000641616 219 ntBASIC17.18■□□□□ 0.34
TOP3BO95985 AC084121.3-201ENST00000641716 218 ntBASIC17.18■□□□□ 0.34
TOP3BO95985 AC105233.6-201ENST00000642093 218 ntBASIC17.18■□□□□ 0.34
TOP3BO95985 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOP3BO95985 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TOP3BO95985 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP3BO95985 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms