Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LINC01225-203ENST00000563550 1244 ntBASIC19.92■□□□□ 0.78
MBD4O95243 AL138918.1-201ENST00000568306 659 ntBASIC19.92■□□□□ 0.78
MBD4O95243 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.92■□□□□ 0.78
MBD4O95243 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.92■□□□□ 0.78
MBD4O95243 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD4O95243 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
MBD4O95243 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MBD4O95243 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
MBD4O95243 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD4O95243 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD4O95243 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD4O95243 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD4O95243 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD4O95243 AC023141.5-201ENST00000458585 616 ntBASIC19.91■□□□□ 0.78
MBD4O95243 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD4O95243 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD4O95243 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD4O95243 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
MBD4O95243 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD4O95243 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD4O95243 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 UBALD1-205ENST00000590891 2641 ntBASIC19.9■□□□□ 0.78
MBD4O95243 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 FAM58DP-201ENST00000428076 619 ntBASIC19.9■□□□□ 0.78
MBD4O95243 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 KRT18P34-201ENST00000488218 1270 ntBASIC19.9■□□□□ 0.78
MBD4O95243 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD4O95243 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 AL031731.1-201ENST00000642131 2094 ntBASIC19.9■□□□□ 0.78
MBD4O95243 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD4O95243 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD4O95243 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD4O95243 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MBD4O95243 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MBD4O95243 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MBD4O95243 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms