Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CSPG5O95196 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.96■□□□□ 0.47
CSPG5O95196 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG5O95196 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 KRT8P23-201ENST00000560090 1207 ntBASIC17.96■□□□□ 0.47
CSPG5O95196 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CSPG5O95196 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG5O95196 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CSPG5O95196 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSPG5O95196 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG5O95196 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG5O95196 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG5O95196 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 AC099398.1-201ENST00000567919 2776 ntBASIC17.95■□□□□ 0.46
CSPG5O95196 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.95■□□□□ 0.46
CSPG5O95196 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 AC241585.1-201ENST00000433527 519 ntBASIC17.95■□□□□ 0.46
CSPG5O95196 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.95■□□□□ 0.46
CSPG5O95196 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.95■□□□□ 0.46
CSPG5O95196 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.95■□□□□ 0.46
CSPG5O95196 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 AL138918.1-201ENST00000568306 659 ntBASIC17.95■□□□□ 0.46
CSPG5O95196 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.95■□□□□ 0.46
CSPG5O95196 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.95■□□□□ 0.46
CSPG5O95196 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CSPG5O95196 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG5O95196 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG5O95196 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.94■□□□□ 0.46
CSPG5O95196 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CSPG5O95196 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.94■□□□□ 0.46
CSPG5O95196 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 OR8S1-201ENST00000310194 1080 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CSPG5O95196 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 MRPS18AP1-201ENST00000414458 589 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.94■□□□□ 0.46
CSPG5O95196 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.94■□□□□ 0.46
CSPG5O95196 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CSPG5O95196 AL662799.1-202ENST00000614205 422 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 AC025048.6-201ENST00000634326 1161 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 LINC00304-203ENST00000565008 1864 ntBASIC17.94■□□□□ 0.46
CSPG5O95196 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CSPG5O95196 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CSPG5O95196 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CSPG5O95196 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG5O95196 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms