Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17■□□□□ 0.31
USP1O94782 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
USP1O94782 SART3-203ENST00000546611 1184 ntBASIC17■□□□□ 0.31
USP1O94782 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP1O94782 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17■□□□□ 0.31
USP1O94782 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17■□□□□ 0.31
USP1O94782 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17■□□□□ 0.31
USP1O94782 AC008608.2-201ENST00000606089 416 ntBASIC17■□□□□ 0.31
USP1O94782 AC004706.3-202ENST00000621574 984 ntBASIC17■□□□□ 0.31
USP1O94782 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17■□□□□ 0.31
USP1O94782 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
USP1O94782 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
USP1O94782 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
USP1O94782 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
USP1O94782 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
USP1O94782 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.99■□□□□ 0.31
USP1O94782 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.99■□□□□ 0.31
USP1O94782 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.99■□□□□ 0.31
USP1O94782 MTDHP4-201ENST00000600287 670 ntBASIC16.99■□□□□ 0.31
USP1O94782 REXO1L6P-202ENST00000619970 1078 ntBASIC16.99■□□□□ 0.31
USP1O94782 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
USP1O94782 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP1O94782 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.99■□□□□ 0.31
USP1O94782 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.98■□□□□ 0.31
USP1O94782 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.98■□□□□ 0.31
USP1O94782 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.98■□□□□ 0.31
USP1O94782 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
USP1O94782 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
USP1O94782 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.98■□□□□ 0.31
USP1O94782 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.98■□□□□ 0.31
USP1O94782 SCARNA2-201ENST00000458748 420 ntBASIC16.98■□□□□ 0.31
USP1O94782 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.98■□□□□ 0.31
USP1O94782 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 LINC01711-201ENST00000598340 967 ntBASIC16.98■□□□□ 0.31
USP1O94782 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.98■□□□□ 0.31
USP1O94782 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms