Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC006449.5-201ENST00000610658 2098 ntBASIC16.73■□□□□ 0.27
LDB2O43679 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
LDB2O43679 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
LDB2O43679 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
LDB2O43679 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LDB2O43679 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.72■□□□□ 0.27
LDB2O43679 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.72■□□□□ 0.27
LDB2O43679 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.72■□□□□ 0.27
LDB2O43679 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.72■□□□□ 0.27
LDB2O43679 AL031432.2-201ENST00000566714 459 ntBASIC16.72■□□□□ 0.27
LDB2O43679 AL928711.1-201ENST00000570165 459 ntBASIC16.72■□□□□ 0.27
LDB2O43679 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LDB2O43679 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.72■□□□□ 0.27
LDB2O43679 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LDB2O43679 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LDB2O43679 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB2O43679 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.71■□□□□ 0.27
LDB2O43679 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 RNU1-129P-201ENST00000384064 167 ntBASIC16.71■□□□□ 0.27
LDB2O43679 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 AC007967.2-201ENST00000432613 625 ntBASIC16.71■□□□□ 0.27
LDB2O43679 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB2O43679 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB2O43679 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB2O43679 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB2O43679 U1.21-201ENST00000580816 167 ntBASIC16.71■□□□□ 0.27
LDB2O43679 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.71■□□□□ 0.27
LDB2O43679 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LDB2O43679 GPAA1P2-202ENST00000606848 1787 ntBASIC16.71■□□□□ 0.27
LDB2O43679 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LDB2O43679 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB2O43679 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
LDB2O43679 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 AC092364.2-201ENST00000596710 2692 ntBASIC16.7■□□□□ 0.26
LDB2O43679 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms