Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.51□□□□□ -0.57
NDUFA1O15239 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.51□□□□□ -0.57
NDUFA1O15239 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 KRT18P57-201ENST00000443599 1254 ntBASIC11.51□□□□□ -0.57
NDUFA1O15239 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.51□□□□□ -0.57
NDUFA1O15239 HLA-J-202ENST00000469281 1241 ntBASIC11.51□□□□□ -0.57
NDUFA1O15239 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.51□□□□□ -0.57
NDUFA1O15239 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 GPR89P-201ENST00000407924 1495 ntBASIC11.51□□□□□ -0.57
NDUFA1O15239 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
NDUFA1O15239 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC103564.2-201ENST00000432853 1299 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 KRT18P38-201ENST00000449496 1282 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC109462.3-201ENST00000573934 613 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC012306.2-201ENST00000609350 630 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.5□□□□□ -0.57
NDUFA1O15239 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC073508.3-201ENST00000619697 1419 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms