Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AC104306.2-201ENST00000451877 341 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 CHMP4BP1-201ENST00000556017 588 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 MIR4722-201ENST00000578292 60 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AL022328.3-201ENST00000607943 679 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AC138028.6-201ENST00000616106 1482 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 UPF3AP2-201ENST00000457924 1132 ntBASIC20.74■□□□□ 0.91
RGPD3A6NKT7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RGPD3A6NKT7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 BAATP1-201ENST00000412284 1225 ntBASIC20.73■□□□□ 0.91
RGPD3A6NKT7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RGPD3A6NKT7 AL355312.1-201ENST00000407115 2176 ntBASIC20.73■□□□□ 0.91
RGPD3A6NKT7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 MTX1P1-201ENST00000440904 838 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 FAM86LP-201ENST00000478302 853 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AC091271.1-201ENST00000611877 1162 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AC006277.1-201ENST00000624348 1610 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 LDHBP1-201ENST00000455730 1119 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 ENPP7P5-201ENST00000541031 1031 ntBASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.72■□□□□ 0.91
RGPD3A6NKT7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.71■□□□□ 0.91
RGPD3A6NKT7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms