Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 AC006538.1-201ENST00000567905 1585 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 HLA-J-202ENST00000469281 1241 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 AC016734.2-201ENST00000624325 1377 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 PAUPAR-201ENST00000630360 2965 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 LINC00895-201ENST00000629028 1637 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 AC022188.1-201ENST00000620960 1664 ntBASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GOLGA6L4A6NEF3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC19.39■□□□□ 0.7
GOLGA6L4A6NEF3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GOLGA6L4A6NEF3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 RCN1P2-201ENST00000398357 915 ntBASIC19.38■□□□□ 0.69
GOLGA6L4A6NEF3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms