Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 PRELID1P1-202ENST00000567272 903 ntBASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 AL805961.1-202ENST00000641562 540 ntBASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 AF228730.7-201ENST00000641842 219 ntBASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 SAPCD2P3-201ENST00000455031 850 ntBASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV7S3A2A0A539 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 AC073621.1-201ENST00000392730 636 ntBASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 CYP2A7P1-201ENST00000595391 815 ntBASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 AC107918.4-202ENST00000641623 219 ntBASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TCRBV7S3A2A0A539 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV7S3A2A0A539 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TCRBV7S3A2A0A539 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV7S3A2A0A539 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 OR6D1P-203ENST00000641209 4860 ntBASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 KRT18P27-201ENST00000427733 1299 ntBASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 RPS2P1-201ENST00000434010 821 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms