Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LINC00895-201ENST00000629028 1637 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 HBZP1-201ENST00000354915 429 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 KLF4P1-201ENST00000412782 1185 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ATP5G1P1-201ENST00000448724 379 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 MIR4497-201ENST00000583208 89 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AL138831.2-201ENST00000606564 490 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AC010491.1-201ENST00000563101 2797 ntBASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV18A0A075B6X5 AC126177.1-201ENST00000547829 2218 ntBASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV18A0A075B6X5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 AL603832.2-201ENST00000566195 2125 ntBASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 AL161772.1-201ENST00000610494 4412 ntBASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV18A0A075B6X5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms