Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 CYP2A7P1-201ENST00000595391 815 ntBASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 AL691432.3-201ENST00000621860 400 ntBASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 AC148477.8-201ENST00000624298 468 ntBASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.88■□□□□ 0.77
CYP46A1Q9Y6A2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 RPS2P28-201ENST00000314255 741 ntBASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 AC005412.3-201ENST00000580309 715 ntBASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 PGM5P2-202ENST00000637225 1043 ntBASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 AL031731.1-201ENST00000642131 2094 ntBASIC19.87■□□□□ 0.77
CYP46A1Q9Y6A2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 AC079781.3-201ENST00000449110 356 ntBASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 RN7SL510P-201ENST00000581311 263 ntBASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 AC005593.1-201ENST00000624894 515 ntBASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 AC026691.1-201ENST00000602502 2017 ntBASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CYP46A1Q9Y6A2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms