Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.39■□□□□ 0.38
YIPF1Q9Y548 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.39■□□□□ 0.38
YIPF1Q9Y548 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
YIPF1Q9Y548 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 AC236430.1-201ENST00000402231 743 ntBASIC17.39■□□□□ 0.37
YIPF1Q9Y548 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 TSPY16P-201ENST00000449843 468 ntBASIC17.39■□□□□ 0.37
YIPF1Q9Y548 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 AP002490.2-201ENST00000524791 560 ntBASIC17.39■□□□□ 0.37
YIPF1Q9Y548 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 SPDYE12P-201ENST00000618416 771 ntBASIC17.39■□□□□ 0.37
YIPF1Q9Y548 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
YIPF1Q9Y548 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC060834.1-201ENST00000443027 2032 ntBASIC17.38■□□□□ 0.37
YIPF1Q9Y548 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC002472.2-201ENST00000442739 958 ntBASIC17.38■□□□□ 0.37
YIPF1Q9Y548 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AL512638.1-201ENST00000457493 794 ntBASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 SPTSSB-204ENST00000617024 1292 ntBASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AL139011.1-202ENST00000642063 584 ntBASIC17.38■□□□□ 0.37
YIPF1Q9Y548 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF1Q9Y548 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 FAM220BP-201ENST00000377689 816 ntBASIC17.37■□□□□ 0.37
YIPF1Q9Y548 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AC241585.1-201ENST00000433527 519 ntBASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms