Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC005521.1-201ENST00000393351 872 ntBASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AL020989.1-201ENST00000422979 469 ntBASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC011498.5-201ENST00000592027 486 ntBASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 AC133561.5-201ENST00000635547 218 ntBASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
UBE2D4Q9Y2X8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 AC148477.5-201ENST00000625164 1645 ntBASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 PMPCAP1-201ENST00000508114 1576 ntBASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBE2D4Q9Y2X8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC002310.6-201ENST00000624451 1377 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AL671277.2-201ENST00000458060 996 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 KRT8P26-201ENST00000534154 1276 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC012306.2-201ENST00000609350 630 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 AC097493.4-201ENST00000641197 219 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 GGT3P-204ENST00000453783 1664 ntBASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.7□□□□□ -0.54
UBE2D4Q9Y2X8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms