Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPO2Q9UMS6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 AC241585.1-201ENST00000433527 519 ntBASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 PCDHB18P-201ENST00000524813 2368 ntBASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SYNPO2Q9UMS6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 GGT3P-204ENST00000453783 1664 ntBASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 FAM207CP-201ENST00000443486 507 ntBASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 AC061975.2-201ENST00000581722 295 ntBASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPO2Q9UMS6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 RNA5SP410-201ENST00000516285 106 ntBASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 BANF1P1-201ENST00000553684 263 ntBASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 MIR4745-201ENST00000577608 62 ntBASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 SPDYE12P-201ENST00000618416 771 ntBASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 AL390754.1-201ENST00000619088 582 ntBASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SYNPO2Q9UMS6 PCGF3-213ENST00000620529 1899 ntBASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPO2Q9UMS6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms