Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 UXT-AS1-201ENST00000590504 1525 ntBASIC17.33■□□□□ 0.37
HPS4Q9NQG7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 RNU1-129P-201ENST00000384064 167 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 SPDYE14P-201ENST00000442619 822 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 COX20P2-201ENST00000452636 358 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 KRT8P23-201ENST00000560090 1207 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 AC026150.2-201ENST00000564693 1156 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 U1.21-201ENST00000580816 167 ntBASIC17.33■□□□□ 0.36
HPS4Q9NQG7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS4Q9NQG7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 WASH6P-202ENST00000359512 1437 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 TOP3BP1-201ENST00000420768 1380 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AC055876.3-201ENST00000431496 288 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AC091167.2-201ENST00000579581 588 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AC138761.1-201ENST00000584393 385 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AL031055.1-201ENST00000606362 631 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AC138649.4-201ENST00000612222 287 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AJ011932.1-201ENST00000621707 465 ntBASIC17.32■□□□□ 0.36
HPS4Q9NQG7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HPS4Q9NQG7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 MIR943-201ENST00000401286 94 ntBASIC17.31■□□□□ 0.36
HPS4Q9NQG7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS4Q9NQG7 KLF2P3-201ENST00000451977 1087 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms