Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 AC003669.1-201ENST00000334569 611 ntBASIC17.69■□□□□ 0.42
CD248Q9HCU0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 MCCD1P2-201ENST00000423228 335 ntBASIC17.69■□□□□ 0.42
CD248Q9HCU0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 IGHV3-65-201ENST00000523210 341 ntBASIC17.69■□□□□ 0.42
CD248Q9HCU0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 STK25P1-201ENST00000585406 838 ntBASIC17.69■□□□□ 0.42
CD248Q9HCU0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 NCF1C-201ENST00000438382 1427 ntBASIC17.69■□□□□ 0.42
CD248Q9HCU0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD248Q9HCU0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD248Q9HCU0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 PAUPAR-201ENST00000630360 2965 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 KLF4P1-201ENST00000412782 1185 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 AC004967.1-201ENST00000453589 447 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 AC108073.2-201ENST00000464002 357 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 AC008667.4-201ENST00000607370 168 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 AC134684.3-201ENST00000641758 218 ntBASIC17.68■□□□□ 0.42
CD248Q9HCU0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD248Q9HCU0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.68■□□□□ 0.42
CD248Q9HCU0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD248Q9HCU0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD248Q9HCU0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.67■□□□□ 0.42
CD248Q9HCU0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CD248Q9HCU0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD248Q9HCU0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD248Q9HCU0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD248Q9HCU0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.67■□□□□ 0.42
CD248Q9HCU0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CD248Q9HCU0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD248Q9HCU0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms